Dynamics system for reconfigurable manipulator of uncertainty, based on the fuzzy adaptive algorithm is proposed to approach the system control law from adaptation to friction and external disturbance, the compensation control of the reconfigurable robot arm. At the same time in order to improve the control law of compensation precision and anti-interference performance, reduce the approximation error of the algorithm and the robust items added in the control law. By Lyapunov stability theory proves that the proposed fuzzy adaptive robust fuzzy control law and the adaptive control law can be in reconfigurable manipulator dynamics contained in friction and the external disturbance to ensure the stability of the system. Last three do f reconfigurable robot arm as an example to design a reconfigurable robotic arm controller, the simulation results show that the algorithm has good trajectory tracking performance, and proves the feasibility and effectiveness of the algorithm.