In the recently discovered kagome superconductor AV3Sb5 (A = K, Rb, and Cs), the superconductivity is intertwined with an unconventional charge density wave order. Its pairing symmetry remains elusive owing to the lack of direct measurement of the superconducting gap in the momentum space. In this letter, utilizing laser-based ultra-high-resolution and low-temperature angle-resolved photoemission spectroscopy, we observe anisotropic Cooper pairing in kagome superconductor CsV3Sb5. We detect a highly anisotropic superconducting gap structure with an anisotropy over 80% and the gap maximum along the V-V bond direction on a Fermi surface originated from the 3d-orbital electrons of the V kagome lattice. It is in stark contrast to the isotropic superconducting gap structure on the other Fermi surface that is occupied by Sb 5p-orbital electrons. Our observation of the anisotropic Cooper pairing in pristine CsV3Sb5 is fundamental for understanding intertwined orders in the ground state of kagome superconductors.