The $e^+e^-\to\eta\gamma$ cross section is measured in the center-of-mass energy range from 1.07 to 2.00 GeV in the decay channel $\eta\to 3\pi^0$, $\pi^0\to\gamma\gamma$. The data set with an integrated luminosity of 242 pb$^{-1}$ accumulated in the experiment with the SND detector at the VEPP-2000 $e^+e^-$ collider is analyzed. Comment: 12 pages, 3 figures