The characteristics of a geological disposal system that can accommodate increasingly higher burn-up levels of spent fuel were assessed based on the Korea reference disposal system concept. First, a status investigation that included a projection of spent fuel quantity versus burn-up was carried out to demonstrate the trend toward higher burn-up levels. Next, the main features of the Korea reference disposal system were introduced. Finally, the disposal tunnel length, excavation volume, and raw materials (e.g., a cast insert, copper, bentonite and backfill) necessary for a disposal system were comprehensively analyzed to define the characteristics and overall effects on geological disposal at increasingly higher burn-up levels. Our study determined that it is reasonable to use a canister containing 4 spent fuel assemblies with burn-up levels up to 50GWD/MTU, while a canister containing 3 spent fuel assemblies can accommodate burn-up levels beyond 50GWD/MTU. A remarkable increase of 33% in disposal tunnel length and that of 30% in excavation volume were observed as the burn-up increased from 50 to 60GWD/MTU. However, this was offset by a reduction of 17% in raw materials used in canister fabrication. Therefore, it seems that spent fuel at increasingly higher burn-up levels is not a serious concern for deep geological disposal in Korea.