MOESM1 of Guidelines for whole genome bisulphite sequencing of intact and FFPET DNA on the Illumina HiSeq X Ten
- Resource Type
- Authors
- Shalima Nair; Phuc-Loi Luu; Wenjia Qu; Maddugoda, Madhavi; Huschtscha, Lily; Reddel, Roger; Chenevix-Trench, Georgia; Toso, Martina; Kench, James; Horvath, Lisa; Hayes, Vanessa; Stricker, Phillip; Hughes, Timothy; White, Deborah; Rasko, John; Wong, Justin; Clark, Susan
- Source
- Subject
- Language
Additional file 1:Â Table 1. Comparison of number of SNPs called in both WGBS and spike-in WGS data at 13x and 30x coverage. Table 2. Comparison of number of SNPs concordant in spike-in WGS data with WGS-Gold Standard at 30x coverage. Table 3. Comparison of number of SNPs concordant in WGBS data with WGS-Gold Standard at 30x coverage. Table 4. Percentage of SNPs observed across different genomic contexts for WGS-GS and WGBS.