Due to rapid changes occurring within the Nuclear Weapons complex, the need for integrated planning designed to combine multiple program needs into one strategic plan has become a necessity. This is more apparent as diverse DOE programs compete for dwindling resources. These programs range from traditional production operations, environmental and waste management, to facility transition, economic development, decontamination and decommissioning, and environmental restoration activities. Each program can influence another, thus increasing the difficulty of distinguishing program elements. The method in developing comprehensive plans becomes even more complicated when environmental compliance issues, regulatory agreements and stakeholder values are considered. AT the Department of Energy`s (DOE) Rocky Flats Plant (RFP), all of these program conditions exist. This paper addresses a set of tools which are being developed at RFP that provides key planning elements and alternatives assessment for the DOE`s Office of Planning and Integration (OPI) and National Environmental Policy Act (NEPA) Compliance Officer at RFP. This set of tools is referred to as the Systems Engineering Analysis (SEA).