Mineral resources are are non-renewable precious resources and one of the basic sources of human production and life. At present, the daily work of the mineral management department involves the production of a large number of reports, maps, official document receiving and sending, transmission, examination and approval, query statistics and other work. Due to the low efficiency of data collection, analysis and supervision in all aspects of the life cycle of mining rights, the real-time supervision and management of the exploration, mining, reserves change and development and utilization of mining rights cannot be realized by the mineral regulatory authorities, so it is urgent to build an efficient mineral resource management system to meet the above challenges. This paper mainly studies the design process system of mineral resource management system based on big data technology and GIS technology, which integrates big data technology and GIS technology, covering the functions of mining right management, exploration right management, GIS map management, geological exploration management, resource reserve management, achievement resource database management, data statistical analysis management, etc. The system makes full use of the spatial analysis advantages of GIS system. The government’s mineral supervision department can effectively realize the real-time supervision of the development and utilization of mineral resources. It can also improve the refined production management ability of mineral enterprises under the current mining situation and the adaptability to market changes, and help the industrial upgrading and business model innovation of mineral enterprises.