Background: Coronavirus 2019 (COVID-19) spreads rapidly worldwide and causes severe acute respiratory syndrome. The current study aimed at evaluating the relationship between the whole-brain functional connections in resting state and cognitive impairments in patients with COVID-19 compared with that of a healthy control group. Methods: Resting-state fMRI and Montreal cognitive assessment (MoCA) data were obtained from 29 patients of the acute stage of COVID-19 on the third day of admission and 20 healthy controls. Cross-correlation of the mean resting-state signals was determined in the voxels of 23 IC (Independent Components) of brain neural circuits. To assess cognitive function and neuropsychological status, MoCA was performed on all participants. The relationship between rs-fMRI information, neuropsychological status, and paraclinical data were analyzed. Results: The COVID-19 group got a lower mean MoCA score and showed a significant reduction in the functional connectivity of the IC14 (P