Table S1. Applications integrated in NanoDJ. Text S1. Testing on case study datasets. Table S2. Datasets for illustrative uses of NanoDJ. Table S3. Comparison of de novo assemblies using different inputs or with an assembly corrector. Table S4. Comparison of three de novo assemblers in a high-coverage ONT dataset. Table S5. Comparison of results from two hybrid de novo assemblers. Figure S1. Human mitochondrial DNA variant representation against the reference sequence. Table S6. Source of mitochondrial DNA genomes, simulations and classification results. (DOCX 1544 kb)