Genoscapist: online exploration of quantitative profiles along genomes via interactively customized graphical representations.
- Resource Type
- Article
- Authors
- Dérozier, Sandra; Nicolas, Pierre; Mäder, Ulrike; Guérin, Cyprien
- Source
- Bioinformatics. Sep2021, Vol. 37 Issue 17, p2747-2749. 3p.
- Subject
- *WEB design
*TRANSCRIPTOMES
*SOURCE code
*STAPHYLOCOCCUS aureus
*WEBSITES
*BACILLUS subtilis
- Language
- ISSN
- 1367-4803
Summary Genoscapist is a tool to design web interfaces generating high-quality images for interactive visualization of hundreds of quantitative profiles along a reference genome together with various annotations. Relevance is demonstrated by deployment of two websites dedicated to large condition-dependent transcriptome datasets available for Bacillus subtilis and Staphylococcus aureus. Availability and implementation Websites and source code freely accessible at https://genoscapist.migale.inrae.fr [ABSTRACT FROM AUTHOR]